› 4dwy

X-ray diffraction
1.61Å resolution

Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex

Released:
DOI: 10.2210/pdb4dwy/pdb
PDB entry 4dwy coloured by chain, front view.
PDB entry 4dwy coloured by chain, side view.
PDB entry 4dwy coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex.
Mandal PK, Venkadesh S, Gautham N
Acta Crystallogr Sect F Struct Biol Cryst Commun 68 1420-6 (2012)
PMID: 23192018

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-117365 (preferred)
Entry contents:
2 distinct DNA molecules
Macromolecules (2 distinct):
DNA (5'-D(*CP*AP*CP*GP*CP*G)-3') Chains: A, C
Molecule details ›
Chains: A, C
Length: 6 nucleotides
Theoretical weight: 1.79 KDa
Source organism: synthetic construct
Expression system: Not provided
DNA (5'-D(*CP*GP*CP*GP*TP*G)-3') Chains: B, D
Molecule details ›
Chains: B, D
Length: 6 nucleotides
Theoretical weight: 1.83 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand MN 2 x MN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER AXS MICROSTAR
Spacegroup: P21
Unit cell:
a: 24.484Å b: 31.128Å c: 31.675Å
α: 90° β: 103.33° γ: 90°
R-values:
R R work R free
0.203 0.2 0.267
Expression system: Not provided

Quick links

Citations

1 mention without citation

Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex.
Mandal et al. (2012)