› 4e8s

X-ray diffraction
1.24Å resolution

Lambda-[Ru(TAP)2(dppz{Me2}2)]2+ bound to TCGGCGCCGA at high resolution

Released:
DOI: 10.2210/pdb4e8s/pdb
PDB entry 4e8s coloured by chain, front view.
PDB entry 4e8s coloured by chain, side view.
PDB entry 4e8s coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
The Structural Effect of Methyl Substitution on the Binding of Polypyridyl Ru dppz Complexes to DNA
Hall JP, Beer H, Buchner K, Cardin DJ, Cardin CJ
Organometallics (2015)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-117390 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3' Chain: A
Molecule details ›
Chain: A
Length: 10 nucleotides
Theoretical weight: 3.05 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

3 bound ligands:
Ligand BA 1 x BA
Ligand RML 1 x RML
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P43212
Unit cell:
a: 42.4Å b: 42.4Å c: 39.67Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.104 0.103 0.128
Expression system: Not provided

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