› 4f3h

X-ray diffraction
2.5Å resolution

The structural of FimXEAL-c-di-GMP from Xanthomonas campestris

Released:
DOI: 10.2210/pdb4f3h/pdb
PDB entry 4f3h coloured by chain, front view.
PDB entry 4f3h coloured by chain, side view.
PDB entry 4f3h coloured by chain, top view.
Source organism: Xanthomonas campestris pv. campestris
Primary publication:
Structural polymorphism of c-di-GMP bound to an EAL domain and in complex with a type II PilZ-domain protein.
Chin KH, Kuo WT, Yu YJ, Liao YT, Yang MT, Chou SH
Acta Crystallogr D Biol Crystallogr 68 1380-92 (2012)
PMID: 22993092

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-185713 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
PAS domain S-box protein Chain: A
Molecule details ›
Chain: A
Length: 250 amino acids
Theoretical weight: 28.07 KDa
Source organism: Xanthomonas campestris pv. campestris
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8P8F1 (Residues: 437-684; Coverage: 36%)
Gene name: XCC2291
Sequence domains: EAL domain
Structure domains: EAL domain

Ligands and Environments

1 bound ligand:
Ligand C2E 1 x C2E
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSRRC BEAMLINE BL13B1
Spacegroup: P3221
Unit cell:
a: 65.665Å b: 65.665Å c: 121.29Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.26 0.234 0.259
Expression system: Escherichia coli

Quick links

Citations

5 review citations

Mechanistic insights into host adaptation, virulence and epidemiology of the phytopathogen Xanthomonas.
An et al. (2020)
4 more

5 mentions without citation

Diversity of Cyclic Di-GMP-Binding Proteins and Mechanisms.
Chou et al. (2016)
4 more