› 4f9t

X-ray diffraction
1.46Å resolution

Ribosomal protein L1 from Thermus thermophilus with substitution Thr217Ala

Released:
DOI: 10.2210/pdb4f9t/pdb
PDB entry 4f9t coloured by chain, front view.
PDB entry 4f9t coloured by chain, side view.
PDB entry 4f9t coloured by chain, top view.
Source organism: Thermus thermophilus
Primary publication:
[Crystal structures of mutant ribosomal proteins L1].
Nikonova EIu, Volchkov SA, Kliashtornyĭ VG, Tishchenko SV, Kostareva OS, Nevskaia NA, Nikonov OS, Gabdulkhakov AG, Nikulin AD, Davydova NL, Strel'tsov VA, Garber MB, Nikonov SV
Mol Biol (Mosk) 41 688-96 (2007)
PMID: 17936990

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-150937 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Large ribosomal subunit protein uL1 Chain: A
Molecule details ›
Chain: A
Length: 229 amino acids
Theoretical weight: 24.84 KDa
Source organism: Thermus thermophilus
UniProt:
  • Canonical: P27150 (Residues: 1-229; Coverage: 100%)
Gene names: rpl1, rplA
Sequence domains: Ribosomal protein L1p/L10e family
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand MPD 3 x MPD
Ligand MRD 1 x MRD
Ligand SO4 10 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE BW7B
Spacegroup: P21212
Unit cell:
a: 80.94Å b: 62.12Å c: 43.62Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.166 0.164 0.202

Quick links

Citations

2 citation in other articles

High-resolution crystal structure of the isolated ribosomal L1 stalk.
Tishchenko et al. (2012)
1 more