› 4fkc

X-ray diffraction
2.6Å resolution

Recombinant prolidase from Thermococcus sibiricus

Released:
DOI: 10.2210/pdb4fkc/pdb
PDB entry 4fkc coloured by chain, front view.
PDB entry 4fkc coloured by chain, side view.
PDB entry 4fkc coloured by chain, top view.
Source organism: Thermococcus sibiricus MM 739
Primary publication:
Influence of intermolecular contacts on the structure of recombinant prolidase from Thermococcus sibiricus.
Trofimov AA, Slutskaya EA, Polyakov KM, Dorovatovskii PV, Gumerov VM, Popov VO
Acta Crystallogr Sect F Struct Biol Cryst Commun 68 1275-8 (2012)
PMID: 23143231

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-111549 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Xaa-Pro aminopeptidase Chain: A
Molecule details ›
Chain: A
Length: 377 amino acids
Theoretical weight: 42.6 KDa
Source organism: Thermococcus sibiricus MM 739
Expression system: Escherichia coli
UniProt:
  • Canonical: C6A2N7 (Residues: 1-365; Coverage: 100%)
Gene name: TSIB_0821
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand CD 12 x CD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: KURCHATOV SNC BEAMLINE K4.4
Spacegroup: P41212
Unit cell:
a: 89.7Å b: 89.7Å c: 165.22Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.233 0.231 0.269
Expression system: Escherichia coli

Quick links

Citations

1 citations in other articles

Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum.
Are et al. (2016)

3 mentions without citation

Crystallization and preliminary X-ray diffraction analysis of Xaa-Pro dipeptidase from Xanthomonas campestris.
Kumar et al. (2014)
2 more