› 4h09

X-ray diffraction
2.5Å resolution

Crystal structure of a leucine-rich repeat protein (EUBVEN_01088) from Eubacterium ventriosum ATCC 27560 at 2.50 A resolution

Released:
DOI: 10.2210/pdb4h09/pdb
PDB entry 4h09 coloured by chain, front view.
PDB entry 4h09 coloured by chain, side view.
PDB entry 4h09 coloured by chain, top view.
Source organism: Eubacterium ventriosum ATCC 27560
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107802 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
BIG2 domain-containing protein Chains: A, B, C, D, E
Molecule details ›
Chains: A, B, C, D, E
Length: 379 amino acids
Theoretical weight: 41.58 KDa
Source organism: Eubacterium ventriosum ATCC 27560
Expression system: Escherichia coli
UniProt:
  • Canonical: A5Z5V6 (Residues: 33-410; Coverage: 54%)
Gene name: EUBVEN_01088
Sequence domains: BspA type Leucine rich repeat region (6 copies)
Structure domains: Ribonuclease Inhibitor

Ligands and Environments

2 bound ligands:
Ligand PEG 4 x PEG
Ligand EDO 38 x EDO
1 modified residue:
Ligand MSE 30 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P61
Unit cell:
a: 105.513Å b: 105.513Å c: 361.567Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.178 0.176 0.209
Expression system: Escherichia coli

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