› 4ikd

X-ray diffraction
1.6Å resolution

Crystal structure of SNX11 PX domain

Released:
DOI: 10.2210/pdb4ikd/pdb
PDB entry 4ikd coloured by chain, front view.
PDB entry 4ikd coloured by chain, side view.
PDB entry 4ikd coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Xu J, Xu T, Liu J

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-195294 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Sorting nexin-11 Chain: A
Molecule details ›
Chain: A
Length: 172 amino acids
Theoretical weight: 20.2 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9Y5W9 (Residues: 7-170; Coverage: 61%)
Gene name: SNX11
Sequence domains: PX domain
Structure domains: Phox-like domain

Ligands and Environments

2 bound ligands:
Ligand CL 3 x CL
Ligand NA 4 x NA
1 modified residue:
Ligand MLY 6 x MLY

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P212121
Unit cell:
a: 40.12Å b: 62.4Å c: 66.06Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 0.186 0.237
Expression system: Escherichia coli

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