› 4inx

X-ray diffraction
1.85Å resolution

Structure of Pheromone-binding protein 1 in complex with (Z,Z)-11,13- hexadecadienol

Released:
DOI: 10.2210/pdb4inx/pdb
PDB entry 4inx coloured by chain, front view.
PDB entry 4inx coloured by chain, side view.
PDB entry 4inx coloured by chain, top view.
Source organism: Amyelois transitella
Primary publication:
Crystallographic observation of pH-induced conformational changes in the Amyelois transitella pheromone-binding protein AtraPBP1.
di Luccio E, Ishida Y, Leal WS, Wilson DK
PLoS One 8 e53840 (2013)
PMID: 23418423

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-111960 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pheromone-binding protein 1 Chain: A
Molecule details ›
Chain: A
Length: 140 amino acids
Theoretical weight: 15.87 KDa
Source organism: Amyelois transitella
Expression system: Escherichia coli
UniProt:
  • Canonical: D0E9M1 (Residues: 23-162; Coverage: 99%)
Sequence domains: PBP/GOBP family
Structure domains: Pheromone/general odorant binding protein domain

Ligands and Environments

1 bound ligand:
Ligand 1EX 1 x 1EX
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P65
Unit cell:
a: 57.532Å b: 57.532Å c: 93.501Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.168 0.168 0.214
Expression system: Escherichia coli

Quick links

Citations

2 review citations

Odorant Receptors and Odorant-Binding Proteins as Insect Pest Control Targets: A Comparative Analysis.
Venthur et al. (2018)
1 more

1 mention without citation

Crystallographic observation of pH-induced conformational changes in the Amyelois transitella pheromone-binding protein AtraPBP1.
di Luccio et al. (2013)