4iop

X-ray diffraction
3.2Å resolution

Crystal structure of NKp65 bound to its ligand KACL

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-112570 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
C-type lectin domain family 2 member A Chain: A
Molecule details ›
Chain: A
Length: 142 amino acids
Theoretical weight: 16.24 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q6UVW9 (Residues: 46-174; Coverage: 74%)
Gene names: CLEC2A, KACL, UNQ5792/PRO19597
Sequence domains: Lectin C-type domain
Structure domains: Mannose-Binding Protein A, subunit A
Killer cell lectin-like receptor subfamily F member 2 Chain: B
Molecule details ›
Chain: B
Length: 158 amino acids
Theoretical weight: 17.97 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: D3W0D1 (Residues: 63-207; Coverage: 70%)
Gene name: KLRF2
Sequence domains: Lectin C-type domain
Structure domains: Mannose-Binding Protein A, subunit A

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, MAN
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: I4122
Unit cell:
a: 74.64Å b: 74.64Å c: 271.08Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.252 0.252 0.297
Expression system: Spodoptera frugiperda