› 4j77

X-ray diffraction
1.76Å resolution

Crystal structure of beta'-COP/hWbp1 complex

Released:
DOI: 10.2210/pdb4j77/pdb
PDB entry 4j77 coloured by chain, front view.
PDB entry 4j77 coloured by chain, side view.
PDB entry 4j77 coloured by chain, top view.
Source organisms:
Primary publication:
Rules for the recognition of dilysine retrieval motifs by coatomer.
Ma W, Goldberg J
EMBO J 32 926-37 (2013)
PMID: 23481256

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-154453 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Wbp1 Chains: C, D
Molecule details ›
Chains: C, D
Length: 6 amino acids
Theoretical weight: 679 Da
Source organism: Homo sapiens
Expression system: Not provided
Coatomer subunit beta' Chains: A, B
Molecule details ›
Chains: A, B
Length: 301 amino acids
Theoretical weight: 34.29 KDa
Source organism: Saccharomyces cerevisiae
UniProt:
  • Canonical: P41811 (Residues: 1-301; Coverage: 34%)
Gene names: G2827, SEC27, YGL137W
Sequence domains: WD domain, G-beta repeat
Structure domains: YVTN repeat-like/Quinoprotein amine dehydrogenase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: P21
Unit cell:
a: 75.681Å b: 50.935Å c: 82.421Å
α: 90° β: 90.24° γ: 90°
R-values:
R R work R free
0.203 0.202 0.245
Expression system: Not provided

Quick links

Citations

14 review citations

Formation of COPI-coated vesicles at a glance.
Arakel et al. (2018)
13 more

1 mention without citation

Rules for the recognition of dilysine retrieval motifs by coatomer.
Ma et al. (2013)