› 4jhs

X-ray diffraction
3Å resolution

Crystal structure of a C-terminal two domain fragment of human beta-2-glycoprotein 1

Released:
DOI: 10.2210/pdb4jhs/pdb
PDB entry 4jhs coloured by chain, front view.
PDB entry 4jhs coloured by chain, side view.
PDB entry 4jhs coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Bonanno JB, Toro R, Gizzi A, Chan MK, Garrett-Thomson SC, Patel H, Lim S, Matikainen B, Celikgil A, Garforth S, Hillerich B, Seidel R, Rand JH, Almo SC, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136130 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Beta-2-glycoprotein 1 Chain: A
Molecule details ›
Chain: A
Length: 180 amino acids
Theoretical weight: 20.72 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P02749 (Residues: 203-345; Coverage: 44%)
Gene names: APOH, B2G1
Sequence domains:
Structure domains: Complement Module, domain 1

Ligands and Environments

1 bound ligand:
Ligand SO4 3 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: I4132
Unit cell:
a: 157.79Å b: 157.79Å c: 157.79Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.209 0.207 0.25
Expression system: Trichoplusia ni

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