› 4jxm

X-ray diffraction
1.92Å resolution

Crystal structure of RRP9 WD40 repeats

Released:
DOI: 10.2210/pdb4jxm/pdb
PDB entry 4jxm coloured by chain, front view.
PDB entry 4jxm coloured by chain, side view.
PDB entry 4jxm coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Wu X, Tempel W, Xu C, El Bakkouri M, He H, Seitova A, Li Y, Bountra C, Arrowsmith CH, Edwards AM, Min J, Structural Genomics Consortium (SGC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-129143 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
U3 small nucleolar RNA-interacting protein 2 Chain: A
Molecule details ›
Chain: A
Length: 371 amino acids
Theoretical weight: 41.01 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: O43818 (Residues: 118-470; Coverage: 74%)
Gene names: RNU3IP2, RRP9, U355K
Sequence domains: WD domain, G-beta repeat
Structure domains: YVTN repeat-like/Quinoprotein amine dehydrogenase

Ligands and Environments

1 bound ligand:
Ligand UNX 9 x UNX
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P43212
Unit cell:
a: 63.746Å b: 63.746Å c: 167.601Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.167 0.165 0.204
Expression system: Spodoptera frugiperda

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