› 4jyk

X-ray diffraction
1.7Å resolution

Structure of E. coli Transcriptional Regulator RutR with bound uracil

Released:
DOI: 10.2210/pdb4jyk/pdb
PDB entry 4jyk coloured by chain, front view.
PDB entry 4jyk coloured by chain, side view.
PDB entry 4jyk coloured by chain, top view.
Source organism: Escherichia coli K-12
Entry authors: Cooper DR, Knapik AA, Petkowski JJ, Porebski PJ, Osinski T, Almo SC, Minor W, New York Structural Genomics Research Consortium (NYSGRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-142300 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
HTH-type transcriptional regulator RutR Chains: A, B
Molecule details ›
Chains: A, B
Length: 212 amino acids
Theoretical weight: 23.72 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P0ACU2 (Residues: 1-212; Coverage: 100%)
Gene names: JW0998, b1013, rutR, ycdC
Sequence domains:
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand SO4 7 x SO4
Ligand URA 2 x URA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: P21
Unit cell:
a: 43.15Å b: 86.14Å c: 69.019Å
α: 90° β: 106.23° γ: 90°
R-values:
R R work R free
0.122 0.12 0.17
Expression system: Escherichia coli BL21(DE3)

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