› 4lgo

X-ray diffraction
1.7Å resolution

Crystal Structure of N-terminal domain 1 of VompD from Bartonella quintana

Released:
DOI: 10.2210/pdb4lgo/pdb
PDB entry 4lgo coloured by chain, front view.
PDB entry 4lgo coloured by chain, side view.
PDB entry 4lgo coloured by chain, top view.
Source organism: Bartonella quintana
Entry authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-102105 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Surface protein/Bartonella adhesin Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 136 amino acids
Theoretical weight: 14.62 KDa
Source organism: Bartonella quintana
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A0H3LUZ2 (Residues: 214-340; Coverage: 12%)
Gene names: BQ01390, badA1
Sequence domains: Coiled stalk of trimeric autotransporter adhesin

Ligands and Environments

1 bound ligand:
Ligand EDO 2 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: C2
Unit cell:
a: 120.03Å b: 37.11Å c: 109.78Å
α: 90° β: 119.43° γ: 90°
R-values:
R R work R free
0.168 0.167 0.188
Expression system: Escherichia coli

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