› 4lty

X-ray diffraction
1.8Å resolution

Crystal Structure of E.coli SbcD at 1.8 A Resolution

Released:
DOI: 10.2210/pdb4lty/pdb
PDB entry 4lty coloured by chain, front view.
PDB entry 4lty coloured by chain, side view.
PDB entry 4lty coloured by chain, top view.
Source organism: Escherichia coli KO11FL
Primary publication:
Structural basis for DNA recognition and nuclease processing by the Mre11 homologue SbcD in double-strand breaks repair.
Liu S, Tian LF, Liu YP, An XM, Tang Q, Yan XX, Liang DC
Acta Crystallogr D Biol Crystallogr 70 299-309 (2014)
PMID: 24531464

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-164764 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Exonuclease subunit SbcD Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 354 amino acids
Theoretical weight: 39.47 KDa
Source organism: Escherichia coli KO11FL
Expression system: Escherichia coli
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand GOL 4 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P1
Unit cell:
a: 62.138Å b: 69.359Å c: 95.023Å
α: 72.21° β: 84.1° γ: 83.77°
R-values:
R R work R free
0.158 0.156 0.193
Expression system: Escherichia coli

Quick links

Citations

2 review citations

Envisioning the dynamics and flexibility of Mre11-Rad50-Nbs1 complex to decipher its roles in DNA replication and repair.
Lafrance-Vanasse et al. (2015)
1 more