› 4mjf

X-ray diffraction
1.99Å resolution

Crystal structure of a DUF4348 family protein (BVU_2238) from Bacteroides vulgatus ATCC 8482 at 1.99 A resolution

Released:
DOI: 10.2210/pdb4mjf/pdb
PDB entry 4mjf coloured by chain, front view.
PDB entry 4mjf coloured by chain, side view.
PDB entry 4mjf coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107880 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4348 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 263 amino acids
Theoretical weight: 31.39 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6L2I4 (Residues: 25-286; Coverage: 92%)
Gene name: BVU_2238
Sequence domains: Domain of unknown function (DUF4348)

Ligands and Environments

4 bound ligands:
Ligand CXS 2 x CXS
Ligand SO4 4 x SO4
Ligand EDO 5 x EDO
Ligand CL 4 x CL
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: C2
Unit cell:
a: 64.719Å b: 71.913Å c: 65.504Å
α: 90° β: 92.31° γ: 90°
R-values:
R R work R free
0.193 0.191 0.22
Expression system: Escherichia coli

Quick links