› 4n0r

X-ray diffraction
1.8Å resolution

Crystal structure of a putative glycoside hydrolase (BVU_0362) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution

Released:
DOI: 10.2210/pdb4n0r/pdb
PDB entry 4n0r coloured by chain, front view.
PDB entry 4n0r coloured by chain, side view.
PDB entry 4n0r coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107850 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF5060 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 513 amino acids
Theoretical weight: 60.14 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6KXB7 (Residues: 23-534; Coverage: 100%)
Gene name: BVU_0362
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand UNL 2 x UNL
Ligand NI 10 x NI
Ligand GOL 6 x GOL
1 modified residue:
Ligand MSE 26 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P21212
Unit cell:
a: 226.439Å b: 67.684Å c: 90.066Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.152 0.15 0.18
Expression system: Escherichia coli

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