› 4p3t

X-ray diffraction
1.6Å resolution

Crystal structure of the bacterial A1408C-mutant ribosomal decoding site

Released:
DOI: 10.2210/pdb4p3t/pdb
PDB entry 4p3t coloured by chain, front view.
PDB entry 4p3t coloured by chain, side view.
PDB entry 4p3t coloured by chain, top view.
Source organism: synthetic construct
Entry authors: Kondo J, Koganei M

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196849 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-D(*UP*UP*GP*CP*GP*UP*CP*CP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 23 nucleotides
Theoretical weight: 7.41 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand 5BU 2 x 5BU

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE BL-5A
Spacegroup: P21
Unit cell:
a: 33.437Å b: 40.475Å c: 41.272Å
α: 90° β: 103.07° γ: 90°
R-values:
R R work R free
0.248 0.248 0.271
Expression system: Not provided

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