› 4pwt

X-ray diffraction
1.75Å resolution

Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92

Released:
DOI: 10.2210/pdb4pwt/pdb
PDB entry 4pwt coloured by chain, front view.
PDB entry 4pwt coloured by chain, side view.
PDB entry 4pwt coloured by chain, top view.
Source organism: Yersinia pestis CO92
Entry authors: Maltseva N, Kim Y, Osipiuk J, Anderson WF, Joachimiak A, Center for Structural Genomics of Infectious Diseases (CSGID)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104692 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peptidoglycan-associated lipoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 131 amino acids
Theoretical weight: 14.57 KDa
Source organism: Yersinia pestis CO92
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A2U2GZX0 (Residues: 38-168; Coverage: 89%)
Gene names: YPO1125, excC, pal
Sequence domains: OmpA family
Structure domains: OmpA-like domain

Ligands and Environments

3 bound ligands:
Ligand SO4 2 x SO4
Ligand FMT 2 x FMT
Ligand POP 1 x POP
1 modified residue:
Ligand MSE 9 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P31
Unit cell:
a: 65.015Å b: 65.015Å c: 86.967Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.17 0.168 0.2
Expression system: Escherichia coli

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