› 4qc8

X-ray diffraction
3.2Å resolution

Structural annotation of pathogenic bovine Parvovirus-1

Released:
DOI: 10.2210/pdb4qc8/pdb
PDB entry 4qc8 coloured by chain, front view.
PDB entry 4qc8 coloured by chain, side view.
PDB entry 4qc8 coloured by chain, top view.
Source organism: Bovine parvovirus 1
Primary publication:
Structure of an enteric pathogen, bovine parvovirus.
Kailasan S, Halder S, Gurda B, Bladek H, Chipman PR, McKenna R, Brown K, Agbandje-McKenna M
J Virol 89 2603-14 (2015)
PMID: 25520501

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo 60-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-124607 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Parvovirus coat protein VP2 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 536 amino acids
Theoretical weight: 59.74 KDa
Source organism: Bovine parvovirus 1
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: G8GWG8 (Residues: 1-536; Coverage: 100%)
Sequence domains: Parvovirus coat protein VP2
Structure domains: Parvovirus coat protein VP1/VP2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: C2221
Unit cell:
a: 323.45Å b: 381.23Å c: 376.62Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.31 0.31 0.312
Expression system: Spodoptera frugiperda

Quick links

Citations

7 review citations

Twenty-Five Years of Structural Parvovirology.
Mietzsch et al. (2019)
6 more

4 mentions without citation

Structure of an enteric pathogen, bovine parvovirus.
Kailasan et al. (2015)
3 more