› 4qdh

X-ray diffraction
2.4Å resolution

Crystal Structure of the C-terminal Domain of Mouse TLR9

Released:
DOI: 10.2210/pdb4qdh/pdb
PDB entry 4qdh coloured by chain, front view.
PDB entry 4qdh coloured by chain, side view.
PDB entry 4qdh coloured by chain, top view.
Source organisms:
Primary publication:
Crystal structure of the C-terminal domain of mouse TLR9.
Collins B, Wilson IA
Proteins 82 2874-8 (2014)
PMID: 24888966

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-175534 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
LRRNT domain-containing protein; Toll-like receptor 9 Chains: A, B
Molecule details ›
Chains: A, B
Length: 438 amino acids
Theoretical weight: 48.77 KDa
Source organisms: Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q9EQU3 (Residues: 478-753; Coverage: 27%)
  • Canonical: Q4G1L2 (Residues: 126-200; Coverage: 30%)
Gene names: Tlr9, VLRB
Sequence domains:

Ligands and Environments

2 bound ligands:
Ligand NAG 10 x NAG
Ligand SO4 8 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-D
Spacegroup: P3121
Unit cell:
a: 106.025Å b: 106.025Å c: 221.549Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.216 0.214 0.247
Expression system: Trichoplusia ni

Quick links

Citations

5 review citations

Toll-like Receptors and the Control of Immunity.
Fitzgerald et al. (2020)
4 more

6 mentions without citation

Host-pathogen protein-nucleic acid interactions: A comprehensive review.
Jain et al. (2022)
5 more