› 4rck

X-ray diffraction
3Å resolution

Crystal Structure of Uncharacterized Membrane Spanning Protein from Vibrio fischeri

Released:
DOI: 10.2210/pdb4rck/pdb
PDB entry 4rck coloured by chain, front view.
PDB entry 4rck coloured by chain, side view.
PDB entry 4rck coloured by chain, top view.
Source organism: Aliivibrio fischeri ES114
Entry authors: Kim Y, Tesar C, Bearden J, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-176989 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
VWFA domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 220 amino acids
Theoretical weight: 24.51 KDa
Source organism: Aliivibrio fischeri ES114
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q5DZP5 (Residues: 68-284; Coverage: 68%)
Gene name: VF_A0681
Sequence domains: von Willebrand factor type A domain
Structure domains: von Willebrand factor, type A domain

Ligands and Environments

1 bound ligand:
Ligand MG 2 x MG
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P65
Unit cell:
a: 49.734Å b: 49.734Å c: 343.88Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.197 0.195 0.237
Expression system: Escherichia coli BL21(DE3)

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