› 4s1k

X-ray diffraction
2.2Å resolution

Structure of Uranotaenia sapphirina cypovirus (CPV17) polyhedrin at 100 K

Released:
DOI: 10.2210/pdb4s1k/pdb
PDB entry 4s1k coloured by chain, front view.
PDB entry 4s1k coloured by chain, side view.
PDB entry 4s1k coloured by chain, top view.
Source organism: Uranotaenia sapphirina cypovirus
Primary publication:
Structure of CPV17 polyhedrin determined by the improved analysis of serial femtosecond crystallographic data.
Ginn HM, Messerschmidt M, Ji X, Zhang H, Axford D, Gildea RJ, Winter G, Brewster AS, Hattne J, Wagner A, Grimes JM, Evans G, Sauter NK, Sutton G, Stuart DI
Nat Commun 6 6435 (2015)
PMID: 25751308

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177027 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Polyhedrin Chain: A
Molecule details ›
Chain: A
Length: 237 amino acids
Theoretical weight: 26.95 KDa
Source organism: Uranotaenia sapphirina cypovirus
UniProt:
  • Canonical: Q5EK29 (Residues: 1-237; Coverage: 100%)
Sequence domains: Cypovirus polyhedrin

Ligands and Environments

2 bound ligands:
Ligand ATP 1 x ATP
Ligand MG 1 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: I23
Unit cell:
a: 104.879Å b: 104.879Å c: 104.879Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.151 0.148 0.199

Quick links

Citations

7 review citations

Where is crystallography going?
Grimes et al. (2018)
6 more

3 mentions without citation

Serial femtosecond crystallography: A revolution in structural biology.
Martin-Garcia et al. (2016)
2 more