› 4tq4

X-ray diffraction
2.5Å resolution

Structure of a UbiA homolog from Archaeoglobus fulgidus bound to DMAPP and Mg2+

Released:
DOI: 10.2210/pdb4tq4/pdb
PDB entry 4tq4 coloured by chain, front view.
PDB entry 4tq4 coloured by chain, side view.
PDB entry 4tq4 coloured by chain, top view.
Source organism: Archaeoglobus fulgidus DSM 4304
Primary publication:
Structure of a membrane-embedded prenyltransferase homologous to UBIAD1.
Huang H, Levin EJ, Liu S, Bai Y, Lockless SW, Zhou M
PLoS Biol 12 e1001911 (2014)
PMID: 25051182

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-128047 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Bacteriochlorophyll synthase, 33 kDa subunit Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 303 amino acids
Theoretical weight: 33.39 KDa
Source organism: Archaeoglobus fulgidus DSM 4304
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O28625 (Residues: 1-303; Coverage: 100%)
Gene name: AF_1648
Sequence domains: UbiA prenyltransferase family

Ligands and Environments

2 bound ligands:
Ligand MG 8 x MG
Ligand DMA 4 x DMA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: P21
Unit cell:
a: 54.605Å b: 218.922Å c: 65.292Å
α: 90° β: 90.13° γ: 90°
R-values:
R R work R free
0.217 0.215 0.255
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

14 review citations

Structural and Chemical Biology of Terpenoid Cyclases.
Christianson DW. (2017)
13 more

4 mentions without citation

Structural basis for catalysis at the membrane-water interface.
Dufrisne et al. (2017)
3 more