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X-ray diffraction
3.01Å resolution

Aminopeptidase APDkam598 from the archaeon Desulfurococcus kamchatkensis

Released:

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dodecamer (preferred)
PDBe Complex ID:
PDB-CPX-110679 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aminopeptidase from family M42 Chains: A, B
Molecule details ›
Chains: A, B
Length: 394 amino acids
Theoretical weight: 43.26 KDa
Source organism: Desulfurococcus amylolyticus 1221n
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: B8D484 (Residues: 1-369; Coverage: 100%)
Gene name: DKAM_0589
Sequence domains: M42 glutamyl aminopeptidase
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: F23
Unit cell:
a: 234.323Å b: 234.323Å c: 234.323Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.207 0.204 0.263
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'