› 4x1a

X-ray diffraction
0.89Å resolution

Lambda-[Ru(TAP)2(dppz-10,12-Me)]2+ bound to d(TCGGCGCCGA)

Released:
DOI: 10.2210/pdb4x1a/pdb
PDB entry 4x1a coloured by chain, front view.
PDB entry 4x1a coloured by chain, side view.
PDB entry 4x1a coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
The Structural Effect of Methyl Substitution on the Binding of Polypyridyl Ru-dppz Complexes to DNA
Hall JP, Beer H, Buchner K, Cardin DJ, Cardin CJ
Organometallics (2015)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-118246 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3') Chain: A
Molecule details ›
Chain: A
Length: 10 nucleotides
Theoretical weight: 3.05 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

2 bound ligands:
Ligand 3WB 1 x 3WB
Ligand BA 1 x BA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P43212
Unit cell:
a: 42.25Å b: 42.25Å c: 39.55Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.096 0.096 0.106
Expression system: Not provided

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