› 4xat

X-ray diffraction
2.11Å resolution

Crystal structure of the olfactomedin domain from noelin/pancortin/olfactomedin-1

Released:
DOI: 10.2210/pdb4xat/pdb
PDB entry 4xat coloured by chain, front view.
PDB entry 4xat coloured by chain, side view.
PDB entry 4xat coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies.
Hill SE, Donegan RK, Nguyen E, Desai TM, Lieberman RL
PLoS One 10 e0130888 (2015)
PMID: 26121352

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-189268 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Noelin Chain: A
Molecule details ›
Chain: A
Length: 268 amino acids
Theoretical weight: 30.7 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q99784 (Residues: 218-485; Coverage: 57%)
Gene names: NOE1, NOEL1, OLFM1
Sequence domains: Olfactomedin-like domain

Ligands and Environments

3 bound ligands:
Ligand CA 1 x CA
Ligand GOL 2 x GOL
Ligand NA 1 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P212121
Unit cell:
a: 39.681Å b: 68.016Å c: 95.659Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.162 0.157 0.204
Expression system: Escherichia coli

Quick links

Citations

2 review citations

Advances with Long Non-Coding RNAs in Alzheimer's Disease as Peripheral Biomarker.
Garofalo et al. (2021)
1 more

4 mentions without citation

Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies.
Hill et al. (2015)
3 more