› 4ymc

X-ray diffraction
1.88Å resolution

Lambda-[Ru(TAP)2(dppz)]2+ bound to d(CCGGATCCGG)2

Released:
DOI: 10.2210/pdb4ymc/pdb
PDB entry 4ymc coloured by chain, front view.
PDB entry 4ymc coloured by chain, side view.
PDB entry 4ymc coloured by chain, top view.
Source organism: synthetic construct
Entry authors: Gurung SP, Hall JP, Cardin CJ

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-118327 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 10 nucleotides
Theoretical weight: 3.05 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

3 bound ligands:
Ligand BA 1 x BA
Ligand RKL 1 x RKL
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P43212
Unit cell:
a: 47.38Å b: 47.38Å c: 33.83Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.2 0.198 0.257
Expression system: Not provided

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