› 5b5q

X-ray diffraction
1.7Å resolution

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-109107 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Deubiquitinase and deneddylase Dub1 Chain: A
Molecule details ›
Chain: A
Length: 243 amino acids
Theoretical weight: 27.8 KDa
Source organism: Chlamydia trachomatis
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: B0B9A0 (Residues: 159-401; Coverage: 61%)
Gene names: CTL0247, cdu1
Sequence domains: Ulp1 protease family, C-terminal catalytic domain
Deubiquitinase and deneddylase Dub1 Chain: B
Molecule details ›
Chain: B
Length: 249 amino acids
Theoretical weight: 28.5 KDa
Source organism: Chlamydia trachomatis
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: B0B9A0 (Residues: 155-401; Coverage: 62%)
Gene names: CTL0247, cdu1
Sequence domains: Ulp1 protease family, C-terminal catalytic domain

Ligands and Environments

1 bound ligand:
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BESSY BEAMLINE 14.1
Spacegroup: P21
Unit cell:
a: 39.1Å b: 77.573Å c: 68.948Å
α: 90° β: 96.43° γ: 90°
R-values:
R R work R free
0.168 0.165 0.213
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'

Quick links

Citations

21 review citations

The evolution of regulated cell death pathways in animals and their evasion by pathogens.
Tummers et al. (2022)
20 more

2 mentions without citation

A Chlamydia effector combining deubiquitination and acetylation activities induces Golgi fragmentation.
Pruneda et al. (2018)
1 more