› 5c9s

X-ray diffraction
2.7Å resolution

Crystal Structure of the C-terminal domain of Rrp5

Released:
DOI: 10.2210/pdb5c9s/pdb
PDB entry 5c9s coloured by chain, front view.
PDB entry 5c9s coloured by chain, side view.
PDB entry 5c9s coloured by chain, top view.
Source organism: Saccharomyces cerevisiae S288C
Primary publication:
Crystal Structure of the C-terminal domain of Rrp5
Khoshnevis S, Karbstein K
PLoS Biol. (2016)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170121 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
rRNA biogenesis protein RRP5 Chain: B
Molecule details ›
Chain: B
Length: 572 amino acids
Theoretical weight: 64.98 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: Q05022 (Residues: 1163-1729; Coverage: 33%)
Gene names: FMI1, RRP5, YM9959.11C, YMR229C
Sequence domains: S1 RNA binding domain

Ligands and Environments

1 bound ligand:
Ligand GOL 1 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL7-1
Spacegroup: P3221
Unit cell:
a: 114.14Å b: 114.14Å c: 67.84Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.224 0.221 0.283
Expression system: Escherichia coli

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