› 5ca8

X-ray diffraction
2.3Å resolution

Structures of the yeast dynamin-like GTPase Sey1p in complex with GDP

Released:
DOI: 10.2210/pdb5ca8/pdb
PDB entry 5ca8 coloured by chain, front view.
PDB entry 5ca8 coloured by chain, side view.
PDB entry 5ca8 coloured by chain, top view.
Source organism: Candida albicans SC5314
Primary publication:
Structures of the yeast dynamin-like GTPase Sey1p provide insight into homotypic ER fusion.
Yan L, Sun S, Wang W, Shi J, Hu X, Wang S, Su D, Rao Z, Hu J, Lou Z
J Cell Biol 210 961-72 (2015)
PMID: 26370501

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-189894 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Protein SEY1 Chain: A
Molecule details ›
Chain: A
Length: 692 amino acids
Theoretical weight: 79.12 KDa
Source organism: Candida albicans SC5314
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9C0L9 (Residues: 1-692; Coverage: 88%)
Gene names: CAALFM_C604570WA, CaO19.2151, CaO19.9698, NAG6, SEY1
Sequence domains:

Ligands and Environments

2 bound ligands:
Ligand MG 1 x MG
Ligand GDP 1 x GDP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: C2
Unit cell:
a: 228.12Å b: 43.62Å c: 97.56Å
α: 90° β: 108.12° γ: 90°
R-values:
R R work R free
0.233 0.23 0.285
Expression system: Escherichia coli

Quick links

Citations

10 review citations

Shaping the Endoplasmic Reticulum into a Social Network.
Zhang et al. (2016)
9 more

5 mentions without citation

Cryo-EM structure of the yeast U4/U6.U5 tri-snRNP at 3.7 Å resolution.
Nguyen et al. (2016)
4 more