› 5cxm

X-ray diffraction
1.7Å resolution

Crystal structure of the cyanobacterial plasma membrane Rieske protein PetC3 from Synechocystis PCC 6803

Released:
DOI: 10.2210/pdb5cxm/pdb
PDB entry 5cxm coloured by chain, front view.
PDB entry 5cxm coloured by chain, side view.
PDB entry 5cxm coloured by chain, top view.
Source organism: Synechocystis sp. PCC 6803 substr. Kazusa
Primary publication:
Structural and functional characterisation of the cyanobacterial PetC3 Rieske protein family.
Veit S, Takeda K, Tsunoyama Y, Baymann F, Nevo R, Reich Z, Rögner M, Miki K, Rexroth S
Biochim Biophys Acta 1857 1879-1891 (2016)
PMID: 27663073

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159929 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rieske domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 110 amino acids
Theoretical weight: 11.22 KDa
Source organism: Synechocystis sp. PCC 6803 substr. Kazusa
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P74174 (Residues: 24-133; Coverage: 83%)
Gene name: petC
Sequence domains: Rieske [2Fe-2S] domain
Structure domains: Rieske [2Fe-2S] iron-sulphur domain

Ligands and Environments

3 bound ligands:
Ligand FES 4 x FES
Ligand NI 4 x NI
Ligand SO4 1 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: P1
Unit cell:
a: 21.747Å b: 55.011Å c: 80.709Å
α: 80.44° β: 89.87° γ: 84.11°
R-values:
R R work R free
0.185 0.185 0.216
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 citation in other articles

A robust approach to estimate relative phytoplankton cell abundances from metagenomes.
Pierella Karlusich et al. (2023)
2 more

2 mentions without citation

Soluble domains of cytochrome c-556 and Rieske iron-sulfur protein from Chlorobaculum tepidum: Crystal structures and interaction analysis.
Kishimoto et al. (2023)
1 more