› 5dn8

X-ray diffraction
1.76Å resolution

1.76 Angstrom Crystal Structure of GTP-binding Protein Der from Coxiella burnetii in Complex with GDP.

Released:
DOI: 10.2210/pdb5dn8/pdb
PDB entry 5dn8 coloured by chain, front view.
PDB entry 5dn8 coloured by chain, side view.
PDB entry 5dn8 coloured by chain, top view.
Source organism: Coxiella burnetii RSA 493
Entry authors: Minasov G, Shuvalova L, Han A, Kim H-Y, Grimshaw S, Kwon K, Anderson WF, Center for Structural Genomics of Infectious Diseases (CSGID)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
GTPase Der Chain: A
Molecule details ›
Chain: A
Length: 446 amino acids
Theoretical weight: 50.05 KDa
Source organism: Coxiella burnetii RSA 493
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q83C83 (Residues: 1-443; Coverage: 100%)
Gene names: CBU_1245, der, engA
Sequence domains:

Ligands and Environments

1 bound ligand:
Ligand GDP 2 x GDP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: P212121
Unit cell:
a: 44.275Å b: 98.443Å c: 107.968Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.173 0.171 0.204
Expression system: Escherichia coli BL21

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