› 5fjl

X-ray diffraction
1.47Å resolution

Crystal structure of raptor adenovirus 1 fibre head, wild-type form

Released:
DOI: 10.2210/pdb5fjl/pdb
PDB entry 5fjl coloured by chain, front view.
PDB entry 5fjl coloured by chain, side view.
PDB entry 5fjl coloured by chain, top view.
Source organism: Raptor siadenovirus A
Primary publication:
Crystal structure of raptor adenovirus 1 fibre head and role of the beta-hairpin in siadenovirus fibre head domains.
Nguyen TH, Ballmann MZ, Do HT, Truong HN, Benkő M, Harrach B, van Raaij MJ
Virol J 13 106 (2016)
PMID: 27334597

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-123497 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Avian adenovirus fibre N-terminal domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 174 amino acids
Theoretical weight: 19.06 KDa
Source organism: Raptor siadenovirus A
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: F4MI11 (Residues: 324-464; Coverage: 30%)

Ligands and Environments

1 bound ligand:
Ligand CL 4 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALBA BEAMLINE XALOC
Spacegroup: P213
Unit cell:
a: 81.72Å b: 81.72Å c: 81.72Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.158 0.157 0.179
Expression system: Escherichia coli BL21(DE3)

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Citations

1 citations in other articles

Adenoviruses in Avian Hosts: Recent Discoveries Shed New Light on Adenovirus Diversity and Evolution.
Athukorala et al. (2022)

6 mentions without citation

Adenovirus Structure: What Is New?
Gallardo et al. (2021)
5 more