› 5fua

Electron Microscopy
7.6Å resolution

Cryo-EM of BK polyomavirus

Released:
DOI: 10.2210/pdb5fua/pdb
PDB entry 5fua coloured by chain, front view.
PDB entry 5fua coloured by chain, side view.
PDB entry 5fua coloured by chain, top view.
Source organism: Human polyomavirus 1
Primary publication:
New Structural Insights into the Genome and Minor Capsid Proteins of BK Polyomavirus using Cryo-Electron Microscopy.
Hurdiss DL, Morgan EL, Thompson RF, Prescott EL, Panou MM, Macdonald A, Ranson NA
Structure 24 528-536 (2016)
PMID: 26996963
Related structures: EMD-3283

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo 360-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136556 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Major capsid protein VP1 Chains: 1, 2, 3, 4, 5, 6
Molecule details ›
Chains: 1, 2, 3, 4, 5, 6
Length: 362 amino acids
Theoretical weight: 40.15 KDa
Source organism: Human polyomavirus 1
UniProt:
  • Canonical: P03088 (Residues: 1-362; Coverage: 100%)
Sequence domains: Polyomavirus coat protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 7.6Å
Relevant EMDB volumes: EMD-3283

Quick links

Citations

11 review citations

BK Polyomavirus: Clinical Aspects, Immune Regulation, and Emerging Therapies.
Ambalathingal et al. (2017)
10 more

2 mentions without citation

New Structural Insights into the Genome and Minor Capsid Proteins of BK Polyomavirus using Cryo-Electron Microscopy.
Hurdiss et al. (2016)
1 more