› 5i5q

X-ray diffraction
1.42Å resolution

Re refinement of 4mwn.

Released:
DOI: 10.2210/pdb5i5q/pdb
PDB entry 5i5q coloured by chain, front view.
PDB entry 5i5q coloured by chain, side view.
PDB entry 5i5q coloured by chain, top view.
Source organism: Gallus gallus
Primary publication:
Comment on "Structural dynamics of cisplatin binding to histidine in a protein" [Struct. Dyn. 1, 034701 (2014)].
Tanley SW, Helliwell JR
Struct Dyn 3 037101 (2016)
PMID: 27226979

Function and Biology Details

Reaction catalysed: 
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132831 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lysozyme C Chain: A
Molecule details ›
Chain: A
Length: 129 amino acids
Theoretical weight: 14.33 KDa
Source organism: Gallus gallus
UniProt:
  • Canonical: P00698 (Residues: 19-147; Coverage: 100%)
Gene name: LYZ
Sequence domains: C-type lysozyme/alpha-lactalbumin family
Structure domains: Lysozyme

Ligands and Environments

3 bound ligands:
Ligand DMS 1 x DMS
Ligand NO3 3 x NO3
Ligand PT 3 x PT
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER AXS MICROSTAR-H
Spacegroup: P1
Unit cell:
a: 27.346Å b: 32.134Å c: 34.296Å
α: 88.04° β: 71.17° γ: 68.35°
R-values:
R R work R free
0.187 0.185 0.237

Quick links

Citations

3 citation in other articles

The Integrated Resource for Reproducibility in Macromolecular Crystallography: Experiences of the first four years.
Grabowski et al. (2019)
2 more

1 mention without citation

Comment on "Structural dynamics of cisplatin binding to histidine in a protein" [Struct. Dyn. 1, 034701 (2014)].
Tanley et al. (2016)