5i8r

X-ray diffraction
3.65Å resolution

aSMase with zinc

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-148049 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (3 distinct):
Sphingomyelin phosphodiesterase Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 583 amino acids
Theoretical weight: 65.11 KDa
Source organism: Homo sapiens
Expression system: Cricetulus griseus
UniProt:
  • Canonical: P17405 (Residues: 49-631; Coverage: 100%)
Gene names: ASM, SMPD1
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CLSI BEAMLINE 08ID-1
Spacegroup: I222
Unit cell:
a: 191.02Å b: 230.87Å c: 252.32Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.248 0.248 0.254
Expression system: Cricetulus griseus