› 5ip8

X-ray diffraction
1.76Å resolution

Lambda-Ru(TAP)2dppz bound to d(CCGGCTCCGG)

Released:
DOI: 10.2210/pdb5ip8/pdb
PDB entry 5ip8 coloured by chain, front view.
PDB entry 5ip8 coloured by chain, side view.
PDB entry 5ip8 coloured by chain, top view.
Source organism: synthetic construct
Entry authors: Souter JE, Hall JP, Cardin CJ

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-118797 (preferred)
Entry contents:
2 distinct DNA molecules
Macromolecules (2 distinct):
DNA (5'-D(*CP*CP*GP*GP*AP*GP*CP*CP*GP*G)-3') Chain: B
Molecule details ›
Chain: B
Length: 10 nucleotides
Theoretical weight: 3.07 KDa
Source organism: synthetic construct
Expression system: Not provided
DNA (5'-D(*CP*CP*GP*GP*CP*TP*CP*CP*GP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 10 nucleotides
Theoretical weight: 3.02 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

2 bound ligands:
Ligand BA 2 x BA
Ligand RKL 2 x RKL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P43
Unit cell:
a: 47.45Å b: 47.45Å c: 35.13Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.189 0.188 0.22
Expression system: Not provided

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