› 5j7u

X-ray diffraction
2.44Å resolution

Faustovirus major capsid protein

Released:
DOI: 10.2210/pdb5j7u/pdb
PDB entry 5j7u coloured by chain, front view.
PDB entry 5j7u coloured by chain, side view.
PDB entry 5j7u coloured by chain, top view.
Source organism: Faustovirus
Primary publication:
Structure of faustovirus, a large dsDNA virus.
Klose T, Reteno DG, Benamar S, Hollerbach A, Colson P, La Scola B, Rossmann MG
Proc Natl Acad Sci U S A 113 6206-11 (2016)
PMID: 27185929

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-102185 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Putative major capsid protein p72 Chains: A, B, C, D, E, F, G, H, I, J, K, L
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L
Length: 645 amino acids
Theoretical weight: 71.78 KDa
Source organism: Faustovirus
UniProt:
  • Canonical: A0A0H3TLP8 (Residues: 1-133; Coverage: 99%)
Gene names: D5a_00208, E23_00209, E24_00210, PRJ_Fausto_00196
unknown Chains: M, N, O, P, Q, R, S, T, U, V, W, X
Molecule details ›
Chains: M, N, O, P, Q, R, S, T, U, V, W, X
Length: 21 amino acids
Theoretical weight: 1.81 KDa
Source organism: Faustovirus

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-D
Spacegroup: P21
Unit cell:
a: 86.38Å b: 390.83Å c: 130.14Å
α: 90° β: 91.66° γ: 90°
R-values:
R R work R free
0.207 0.205 0.252

Quick links

Citations

11 review citations

Mimivirus: leading the way in the discovery of giant viruses of amoebae.
Colson et al. (2017)
10 more

2 mentions without citation

Current capsid assembly models of icosahedral nucleocytoviricota viruses.
Xian et al. (2020)
1 more