› 5j97

X-ray diffraction
2.55Å resolution

Dimerization domain of cytoplasmic activation/proliferation-associated protein-2 (caprin-2)

Released:
DOI: 10.2210/pdb5j97/pdb
PDB entry 5j97 coloured by chain, front view.
PDB entry 5j97 coloured by chain, side view.
PDB entry 5j97 coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Wu Y, Zhu J, Huang X, Du Z

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179760 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Caprin-2 Chains: A, B
Molecule details ›
Chains: A, B
Length: 137 amino acids
Theoretical weight: 15.82 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q6IMN6 (Residues: 199-329; Coverage: 12%)
Gene names: C1QDC1, CAPRIN2, EEG1, KIAA1873, RNG140
Sequence domains: Caprin-1 dimerization domain

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: P41212
Unit cell:
a: 71.02Å b: 71.02Å c: 133.76Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.214 0.211 0.244
Expression system: Escherichia coli BL21(DE3)

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