› 5jrn

X-ray diffraction
2.84Å resolution

Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution

Released:
DOI: 10.2210/pdb5jrn/pdb
PDB entry 5jrn coloured by chain, front view.
PDB entry 5jrn coloured by chain, side view.
PDB entry 5jrn coloured by chain, top view.
Source organism: Fusarium oxysporum f. sp. vasinfectum 25433
Entry authors: Gomez S, Payne AM, Savko M, Fox GC, Shepard WE, Fernandez FJ, Vega MC

Function and Biology Details

Reaction catalysed: 
Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-197835 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Endo-1,4-beta-xylanase Chain: A
Molecule details ›
Chain: A
Length: 194 amino acids
Theoretical weight: 21.25 KDa
Source organism: Fusarium oxysporum f. sp. vasinfectum 25433
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: X0M5X0 (Residues: 42-232; Coverage: 90%)
Gene name: FOTG_15646
Sequence domains: Glycosyl hydrolases family 11
Structure domains: Jelly Rolls

Ligands and Environments

2 bound ligands:
Ligand GOL 7 x GOL
Ligand 6MJ 1 x 6MJ
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALBA BEAMLINE XALOC
Spacegroup: P21212
Unit cell:
a: 105.7Å b: 36.1Å c: 48.8Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.21 0.209 0.226
Expression system: Escherichia coli BL21(DE3)

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