› 5kw0

X-ray diffraction
1.59Å resolution

T. danielli thaumatin at 100K, Data set 5

Released:
DOI: 10.2210/pdb5kw0/pdb
PDB entry 5kw0 coloured by chain, front view.
PDB entry 5kw0 coloured by chain, side view.
PDB entry 5kw0 coloured by chain, top view.
Source organism: Thaumatococcus daniellii
Primary publication:
Conformational variation of proteins at room temperature is not dominated by radiation damage.
Russi S, González A, Kenner LR, Keedy DA, Fraser JS, van den Bedem H
J Synchrotron Radiat 24 73-82 (2017)
PMID: 28009548

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136331 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Thaumatin I Chain: A
Molecule details ›
Chain: A
Length: 207 amino acids
Theoretical weight: 22.23 KDa
Source organism: Thaumatococcus daniellii
Expression system: Thaumatococcus daniellii
UniProt:
  • Canonical: P02883 (Residues: 23-229; Coverage: 97%)
Sequence domains: Thaumatin family
Structure domains: Thaumatin

Ligands and Environments

2 bound ligands:
Ligand TLA 1 x TLA
Ligand GOL 1 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL14-1
Spacegroup: P41212
Unit cell:
a: 57.814Å b: 57.814Å c: 151.2Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.175 0.173 0.212
Expression system: Thaumatococcus daniellii

Quick links

Citations

2 review citations

Atomic displacement parameters in structural biology.
Carugo O. (2018)
1 more