5lbs

X-ray diffraction
2.41Å resolution

structural basis of Zika and Dengue virus potent antibody cross-neutralization

Released:

Function and Biology Details

Reactions catalysed:
S-adenosyl-L-methionine + a 5'-(5'-triphosphoguanosine)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA]
S-adenosyl-L-methionine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(ribonucleotide)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleotide)-[mRNA]
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Selective hydrolysis of -Xaa-Xaa-|-Yaa- bonds in which each of the Xaa can be either Arg or Lys and Yaa can be either Ser or Ala.
NTP + H(2)O = NDP + phosphate
ATP + H(2)O = ADP + phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-207188 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Envelope protein E Chains: A, B
Molecule details ›
Chains: A, B
Length: 447 amino acids
Theoretical weight: 48.49 KDa
Source organism: Zika virus
Expression system: Drosophila melanogaster
UniProt:
  • Canonical: A0A024B7W1 (Residues: 291-698; Coverage: 12%)
Sequence domains:
Structure domains:
BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 Chains: H, I
Molecule details ›
Chains: H, I
Length: 141 amino acids
Theoretical weight: 14.62 KDa
Source organism: Homo sapiens
Expression system: Drosophila melanogaster
Structure domains: Immunoglobulins
BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 Chains: L, M
Molecule details ›
Chains: L, M
Length: 147 amino acids
Theoretical weight: 15.87 KDa
Source organism: Homo sapiens
Expression system: Drosophila melanogaster
Structure domains: Immunoglobulins

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SOLEIL BEAMLINE PROXIMA 1
Unit cell:
a: 60.799Å b: 121.353Å c: 257.855Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.195 0.194 0.217
Expression system: Drosophila melanogaster