› 5lcb

Hybrid

In situ atomic-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum obtained combining solid-state NMR spectroscopy, cryo electron microscopy and polarization spectroscopy

Released:
DOI: 10.2210/pdb5lcb/pdb
PDB entry 5lcb coloured by chain, front view.
PDB entry 5lcb coloured by chain, side view.
PDB entry 5lcb coloured by chain, top view.
Source organism: Chlorobaculum tepidum TLS
Primary publication:
In situ high-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum.
Nielsen JT, Kulminskaya NV, Bjerring M, Linnanto JM, Rätsep M, Pedersen MØ, Lambrev PH, Dorogi M, Garab G, Thomsen K, Jegerschöld C, Frigaard NU, Lindahl M, Nielsen NC
Nat Commun 7 12454 (2016)
PMID: 27534696
Related structures: EMD-4033

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetradecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-141083 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Bacteriochlorophyll c-binding protein Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N
Length: 59 amino acids
Theoretical weight: 6.16 KDa
Source organism: Chlorobaculum tepidum TLS
Expression system: Chlorobaculum tepidum
UniProt:
  • Canonical: P0A314 (Residues: 1-59; Coverage: 75%)
Gene names: CT1942, csmA
Sequence domains: Bacteriochlorophyll C binding protein

Ligands and Environments

1 bound ligand:
Ligand BCL 14 x BCL
No modified residues

Experiments and Validation Details

Experimental Method: Solid-state NMR, Electron Microscopy
Resolution: 26.5Å
Relevant EMDB volumes: EMD-4033
Expression system: Chlorobaculum tepidum

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Citations

1 review citation

Subcellular Organization: A Critical Feature of Bacterial Cell Replication.
Surovtsev et al. (2018)
9 other articles

1 mention without citation

In situ high-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum.
Nielsen et al. (2016)