› 5lj4

X-ray diffraction
2.17Å resolution

Crystal structure of DNA duplex containing ZP base pair

Released:
DOI: 10.2210/pdb5lj4/pdb
PDB entry 5lj4 coloured by chain, front view.
PDB entry 5lj4 coloured by chain, side view.
PDB entry 5lj4 coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Structural Basis of the Mispairing of an Artificially Expanded Genetic Information System
Reichenbach LF, Sobri AA, Zaccai NR, Agnew CRJ, Burton N, Eperon LP, de Ornellas S, Eperon IC, Brady RL, Burley GA
Chem 1 946-958 (2016)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-118993 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
ODN2 Chains: A, B
Molecule details ›
Chains: A, B
Length: 12 nucleotides
Theoretical weight: 3.71 KDa
Source organism: Homo sapiens
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand CA 4 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: R3
Unit cell:
a: 41.7Å b: 41.7Å c: 99.932Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.222 0.22 0.275
Expression system: Not provided

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