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› 5mqm

X-ray diffraction
2.11Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183771 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Beta-mannosidase-like galactose-binding domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 1105 amino acids
Theoretical weight: 125.14 KDa
Source organism: Bacteroides thetaiotaomicron
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8A931 (Residues: 1-1105; Coverage: 100%)
Gene name: BT_0986
Sequence domains:

Ligands and Environments

4 bound ligands:
Ligand CA 3 x CA
Ligand RPQ 1 x RPQ
Ligand PG4 2 x PG4
Ligand PGE 2 x PGE
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P21
Unit cell:
a: 64.05Å b: 84.81Å c: 120.63Å
α: 90° β: 99.2° γ: 90°
R-values:
R R work R free
0.201 0.199 0.24
Expression system: Escherichia coli

Quick links

Citations

42 review citations

Interactions of commensal and pathogenic microorganisms with the intestinal mucosal barrier.
Martens et al. (2018)
41 more

1 mention without citation

Biochemical characterisation of four rhamnosidases from thermophilic bacteria of the genera Thermotoga, Caldicellulosiruptor and Thermoclostridium.
Baudrexl et al. (2019)