› 5mrr

X-ray diffraction
1.35Å resolution

Crystal structure of L1 protease of Lysobacter sp. XL1

Released:
DOI: 10.2210/pdb5mrr/pdb
Model geometry
Fit model/data
PDB entry 5mrr coloured by chain, front view.
PDB entry 5mrr coloured by chain, side view.
PDB entry 5mrr coloured by chain, top view.
Source organism: Lysobacter sp. XL1
Entry authors: Gabdulkhakov A, Tishchenko S, Lisov A, Leontievsky A

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112371 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lytic endopeptidase preproenzyme Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 199 amino acids
Theoretical weight: 19.85 KDa
Source organism: Lysobacter sp. XL1
Expression system: Escherichia coli
UniProt:
  • Canonical: D2K8B3 (Residues: 200-398; Coverage: 55%)
Gene name: alpA
Sequence domains: Trypsin
Structure domains: Trypsin-like serine proteases

Ligands and Environments

5 bound ligands:
Ligand SO4 6 x SO4
Ligand CL 11 x CL
Ligand GOL 7 x GOL
Ligand TRS 1 x TRS
Ligand NA 1 x NA
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: BESSY BEAMLINE 14.1
Spacegroup: P212121
Unit cell:
a: 63.71Å b: 96.48Å c: 118.18Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.159 0.157 0.19
Expression system: Escherichia coli

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