› 5mvj

X-ray diffraction
2.5Å resolution

Structure of DC8E8 Fab at pH 6.5 crystallized in space-group P1

Released:
DOI: 10.2210/pdb5mvj/pdb
PDB entry 5mvj coloured by chain, front view.
PDB entry 5mvj coloured by chain, side view.
PDB entry 5mvj coloured by chain, top view.
Source organism: Mus musculus
Entry authors: Skrabana R, Novak M, Cehlar O, Kontsekova E

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-213845 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
antibody Fab heavy chain Chains: A, C, E, H
Molecule details ›
Chains: A, C, E, H
Length: 221 amino acids
Theoretical weight: 23.8 KDa
Source organism: Mus musculus
Structure domains: Immunoglobulins
antibody kappa chain Chains: B, D, F, L
Molecule details ›
Chains: B, D, F, L
Length: 219 amino acids
Theoretical weight: 24.28 KDa
Source organism: Mus musculus
Structure domains: Immunoglobulins

Ligands and Environments

1 bound ligand:
Ligand CL 1 x CL
1 modified residue:
Ligand PCA 4 x PCA

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06DA
Spacegroup: P1
Unit cell:
a: 61.22Å b: 82.26Å c: 89.31Å
α: 92.32° β: 95.47° γ: 89.82°
R-values:
R R work R free
0.222 0.219 0.272

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