› 5nhq

Solution NMR

Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein

Released:
DOI: 10.2210/pdb5nhq/pdb
PDB entry 5nhq coloured by chain, ensemble of 12 models, front view.
PDB entry 5nhq coloured by chain, ensemble of 12 models, side view.
PDB entry 5nhq coloured by chain, ensemble of 12 models, top view.
Source organism: JC polyomavirus
Primary publication:
Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein.
Coric P, Saribas AS, Abou-Gharbia M, Childers W, Condra JH, White MK, Safak M, Bouaziz S
J Cell Biochem 118 3268-3280 (2017)
PMID: 28295503

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136553 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Agnoprotein Chain: A
Molecule details ›
Chain: A
Length: 71 amino acids
Theoretical weight: 8.1 KDa
Source organism: JC polyomavirus
Expression system: Not provided
UniProt:
  • Canonical: P03086 (Residues: 1-71; Coverage: 100%)
Sequence domains: Polyomavirus agnoprotein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 49%
Refinement method: DGSA-distance geometry simulated annealing
Expression system: Not provided

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Citations

4 review citations

Expression of novel proteins by polyomaviruses and recent advances in the structural and functional features of agnoprotein of JC virus, BK virus, and simian virus 40.
Saribas et al. (2019)
3 more

1 mention without citation

Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein.
Coric et al. (2017)