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› 5obi

X-ray diffraction
1.6Å resolution

PCE reductive dehalogenase from S. multivorans with 5-METHOXYBENZIMIDAZOLYL-NORCOBAMIDE cofactor

Released:
DOI: 10.2210/pdb5obi/pdb
Model geometry
Fit model/data
PDB entry 5obi coloured by chain, front view.
PDB entry 5obi coloured by chain, side view.
PDB entry 5obi coloured by chain, top view.
Source organism: Sulfurospirillum multivorans DSM 12446
Primary publication:
Selective Utilization of Benzimidazolyl-Norcobamides as Cofactors by the Tetrachloroethene Reductive Dehalogenase of Sulfurospirillum multivorans.
Keller S, Kunze C, Bommer M, Paetz C, Menezes RC, Svatoš A, Dobbek H, Schubert T
J Bacteriol 200 (2018)
PMID: 29378885

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-166049 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Tetrachloroethene reductive dehalogenase catalytic subunit PceA Chains: A, B
Molecule details ›
Chains: A, B
Length: 464 amino acids
Theoretical weight: 52.16 KDa
Source organism: Sulfurospirillum multivorans DSM 12446

Ligands and Environments

4 bound ligands:
Ligand SF4 4 x SF4
Ligand OBL 2 x OBL
Ligand BEN 1 x BEN
Ligand GOL 5 x GOL
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: BESSY BEAMLINE 14.1
Spacegroup: P41
Unit cell:
a: 73.585Å b: 73.585Å c: 185.284Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.152 0.151 0.172

Quick links

Citations

1 review citation

Sharing vitamins: Cobamides unveil microbial interactions.
Sokolovskaya et al. (2020)
8 other articles

1 mention without citation

Selective Utilization of Benzimidazolyl-Norcobamides as Cofactors by the Tetrachloroethene Reductive Dehalogenase of Sulfurospirillum multivorans.
Keller et al. (2018)